plot_mir_count: Plot count of most frequently mentioned miRNA names

In JulFriedrich/miRetrieve: miRNA Text Mining in Abstracts

Description

Plot count of most frequently mentioned miRNA names in a data frame.

Usage

plot_mir_count(
  df,
  top = 10,
  colour = "steelblue3",
  col.mir = miRNA,
  title = NULL
)

Arguments

df	Data frame containing miRNA names.
top	Integer. Specifies number of most frequent miRNA names to plot.
colour	String. Colour of bar plot.
col.mir	Symbol. Column containing miRNA names.
title	String. Plot title.

Details

Plot count of most frequently mentioned miRNA names in a data frame. How many most frequently mentioned miRNAs are plotted is determined via the top argument. Ties among the most frequently mentioned miRNAs are treated as the same rank, e.g. if miR-126, miR-34, and miR-29 were all mentioned the most often, they would all be plotted by specifying top = 1, top = 2, or top = 3.

Value

Bar plot with the most frequently mentioned miRNAs names in df.

See Also

count_mir(), count_mir_threshold(), plot_mir_count_threshold()

Other count functions: count_mir_threshold(), count_mir(), count_snp(), plot_mir_count_threshold()

JulFriedrich/miRetrieve documentation built on Sept. 20, 2021, 11:37 p.m.