SVA confounding analysis framework

Description Usage Arguments Details Value

Generates a plot showing the ratio of explained variance by the Principal Components as a scree plot.

1 2	## S3 method for class 'SVDAnalysis' screeplot(x, ...)

`x`	A list containing the results from the svd_analysis function.
`...`	Arguments to be passed to methods.

This is a generic method taking the output of the svd_analysis function as input. It generates a scree plot showing the ratio of explained variance for the ordered Principal Components. It is very similar to the screeplot function but it uses ggplot2 instead of base graphics.

A ggplot2 scree plot showing the ratio of explained variance for every Principal Component.

Keyeoh/svconfound documentation built on May 15, 2019, 1:25 p.m.