Man pages for KontioJuho/matrinetR
R package for the Analysis of extracellular matrix network dynamics
| available_genes | Identify available, matching and valid target genes from TCGA... |
| compare_nodestats | Compare gene-specific network statistics across cancers |
| Globals | Global variables |
| matrigraph_summary | Matrigraph summary by node.stat attribute |
| matrigraph_to_adjacency | Convert matrigraphs to weighted adjacency matrices |
| matrinet_data | Test title |
| matrinet_estimate | Matrinet network estimation function |
| matrinet_graph | Create matrigraph object |
| matrisome_GTEx | GTEx matrisome gene expression |
| matrisome_TCGA | TCGA matrisome gene expression and clinical data |
| matrixDB_adjacency | Adjacency matrix representation of the matrisome interaction... |
| matrixDB_annotations | Matrisome interaction data from matrixDB |
| matrixDB_edgelist | Matrisome interaction data from matrixDB |
| neighborhood_plot | Plot neighborhood curves |
| pipe | Pipe operator |
