matrinet_data: Test title

In KontioJuho/matrinetR: R package for the Analysis of extracellular matrix network dynamics

Test title

Description

Test title

Usage

matrinet_data(data, quantiles, genenames)

Arguments

data	A dataframe or list of group (cancer) dataframes containing target gene variables as column vectors. Additional variables (e.g. sampleIDs) could be included, target genes/proteins are extracted automatically from the dataframe by the column names of prior_topology object
quantiles	At simplest a numeric vector with two values to discretize gene expression levels. Can be also a list of different levels for each gene and cancer type.
genenames	A character vector of target gene names

Value

A matridata object that can be used as an input for matrinet_estimate function.

Examples

print("matrinet_data(datalist, quantiles, genenames)")

KontioJuho/matrinetR documentation built on June 19, 2022, 3:56 p.m.