matrixDB_adjacency: Adjacency matrix representation of the matrisome interaction...
In KontioJuho/matrinetR: R package for the Analysis of extracellular matrix network dynamics
matrixDB_adjacency R Documentation
Adjacency matrix representation of the matrisome interaction data from matrixDB
Description
A dataset containing the edge list of matrisome interactions
and additional annotations. The variables are defined as follows:
Usage
matrixDB_adjacency
Format
A data frame with 967 rows and 6 variables:
gene.x and gene.y: Each row-wise pair of gene.x and gene.y represents a known matrisome interaction
family.x and family.y: The knowledge-based annotations of gene.x and gene.y specific families within the matrisome
category.x and category.y: The MsigDB based matrisome categories for gene.x and gene.y
KontioJuho/matrinetR documentation built on June 19, 2022, 3:56 p.m.
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| matrixDB_adjacency | R Documentation |
Adjacency matrix representation of the matrisome interaction data from matrixDB
Description
A dataset containing the edge list of matrisome interactions and additional annotations. The variables are defined as follows:
Usage
matrixDB_adjacency
Format
A data frame with 967 rows and 6 variables:
gene.x and gene.y: Each row-wise pair of gene.x and gene.y represents a known matrisome interaction
family.x and family.y: The knowledge-based annotations of gene.x and gene.y specific families within the matrisome
category.x and category.y: The MsigDB based matrisome categories for gene.x and gene.y
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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