compare_nodestats: Compare gene-specific network statistics across cancers

In KontioJuho/matrinetR: R package for the Analysis of extracellular matrix network dynamics

Compare gene-specific network statistics across cancers

Description

Compare gene-specific network statistics across cancers

Usage

compare_nodestats(
  matrigraph_summary,
  genes,
  nodestat_type = "Strength",
  output = "plotly"
)

Arguments

matrigraph_summary	The output of the matrigraph_summary function
genes	A character vector of genenames
nodestat_type	With the default usage of matrigraph_summary, this argument could be "Betweenness", "Closeness", "Strength", or "ExpectedInfluence".
output	oOutput type: either "ggplot" or "plotly"

Value

A grouped barplot

Examples

print("compare_nodestats(matrigraph_summary, genes)")

KontioJuho/matrinetR documentation built on June 19, 2022, 3:56 p.m.