selected_genes: Genes to be used when performing clustering and trajectory...

In KrishnaswamyLab/phemd: Phenotypic EMD for comparison of single-cell samples

Genes to be used when performing clustering and trajectory analyses on melanoma single-cell RNA-seq expression data

Description

This object contains genes to be used when performing clustering and trajectory analyses on melanoma single-cell RNA-seq expression data.

Usage

  data(selected_genes)

Format

Vector of length 44 representing selected genes for performing computational analyses such as generating cell embeddings and clustering cell subtypes.

Source

https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE72056

References

Tirosh, I. et al. Dissecting the multicellular ecosystem of metastatic melanoma by single-cell RNA-seq. Science 352, 189–196 (2016)

KrishnaswamyLab/phemd documentation built on Oct. 2, 2024, 5:10 a.m.