API for Kumquatum/GWENA
Pipeline for augmented co-expression analysis
| Global functions | |
|---|---|
| %nin% | Man page |
| %sub_in% | Man page |
| %sub_nin% | Man page |
| .check_data_expr | Man page Source code |
| .check_gost | Man page Source code |
| .check_module | Man page Source code |
| .check_network | Man page Source code |
| .contingencyTable | Man page Source code |
| .cor_func_match | Man page Source code |
| `%nin%` | Source code |
| `%sub_in%` | Source code |
| `%sub_nin%` | Source code |
| associate_phenotype | Man page Source code |
| bio_enrich | Man page Source code |
| build_graph_from_sq_mat | Man page Source code |
| build_net | Man page Source code |
| compare_conditions | Man page Source code |
| detect_modules | Man page Source code |
| filter_RNA_seq | Man page Source code |
| filter_low_var | Man page Source code |
| get_fit.cor | Man page Source code |
| get_fit.expr | Man page Source code |
| get_hub_degree | Man page Source code |
| get_hub_genes | Man page |
| get_hub_high_co | Man page Source code |
| get_hub_kleinberg | Man page |
| get_sub_clusters | Man page |
| gg_palette | Man page Source code |
| gtex_expr | Man page |
| gtex_traits | Man page |
| is_data_expr | Man page Source code |
| is_gost | Man page Source code |
| is_module | Man page Source code |
| is_network | Man page Source code |
| join_gost | Man page Source code |
| kuehne_expr | Man page |
| kuehne_traits | Man page |
| matchsub | Man page |
| orderAsNumeric | Man page Source code |
| plot_comparison_stats | Man page Source code |
| plot_enrichment | Man page Source code |
| plot_expression_profiles | Man page |
| plot_module | Man page |
| plot_modules_merge | Man page |
| plot_modules_phenotype | Man page |
| quiet | Man page Source code |
| z_summary | Man page Source code |
