Files in LTLA/InteractionSet

Base Classes for Storing Genomic Interaction Data

DESCRIPTION

NAMESPACE

R/AllClasses.R R/AllGenerics.R R/ContactMatrix-methods.R R/GInteractions-methods.R R/GRanges-methods.R R/InteractionSet-methods.R R/boundingBox.R R/conversion.R R/distances.R R/getset.R R/linearize.R R/linkOverlaps.R R/matching.R R/overlaps.R R/pairs.R R/swapAnchors.R R/updateObject.R

inst/CITATION

inst/NEWS.Rd

man/ContactMatrix-accessors.Rd man/ContactMatrix-class.Rd man/ContactMatrix-distances.Rd man/ContactMatrix-overlaps.Rd man/ContactMatrix-sorting.Rd man/ContactMatrix-subset.Rd man/GInteractions-class.Rd man/InteractionSet-class.Rd man/boundingBox.Rd man/conversion.Rd man/distances.Rd man/granges-methods.Rd man/interaction-accessors.Rd man/interaction-bind.Rd man/interaction-compare.Rd man/interaction-subset.Rd man/linearize.Rd man/linkOverlaps.Rd man/overlaps.Rd man/pairs.Rd man/updateObject.Rd

src/box_bounds.cpp

src/detect_overlaps.cpp

src/init.cpp

src/iset.h

src/link_overlaps.cpp

src/overlap_utils.cpp

src/overlap_utils.h

tests/testthat.R tests/testthat/test-CM.R tests/testthat/test-GI.R tests/testthat/test-IS.R tests/testthat/test-box.R tests/testthat/test-compare.R tests/testthat/test-convert.R tests/testthat/test-dist.R tests/testthat/test-grmeth.R tests/testthat/test-linear.R tests/testthat/test-link.R tests/testthat/test-olap.R vignettes/interactions.Rmd

LTLA/InteractionSet documentation built on July 3, 2023, 8:44 a.m.