casecontrolfunction: casecontrolfunction
In LULIU1816/TwoSLSanalysis: TwoSLSanylsis is an two-stage least squares procedure for TCGA analysis. TwoSLSanylsis can provide the estimate of causal effect with the survival data download from TCGA.
View source: R/casecontrolfunction.R
Description
structure 1:1 case-control gene expression data
Usage
1
casecontrolfunction(data_count,data_tumor)
Examples
1
2
3
4
5
6
7
8
9
library("data.table")
#read expression data
data_normalized<-fread("LUSC__gene.normalized_RNAseq__tissueTypeAll__20181022104424.txt",data.table=F,head=T)
data_count<-fread("LUSC__gene_RNAseq__tissueTypeAll__20181022105257.txt",data.table=F,head=T)
data_normalized <- as.data.frame(data_normalized)
data_count <-as.data.frame(data_count)
case_control_data <- casecontrolfunction(data_count,data_tumor)
LULIU1816/TwoSLSanalysis documentation built on Nov. 18, 2019, 5:41 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
View source: R/casecontrolfunction.R
Description
structure 1:1 case-control gene expression data
Usage
1 | casecontrolfunction(data_count,data_tumor)
|
Examples
1 2 3 4 5 6 7 8 9 | library("data.table")
#read expression data
data_normalized<-fread("LUSC__gene.normalized_RNAseq__tissueTypeAll__20181022104424.txt",data.table=F,head=T)
data_count<-fread("LUSC__gene_RNAseq__tissueTypeAll__20181022105257.txt",data.table=F,head=T)
data_normalized <- as.data.frame(data_normalized)
data_count <-as.data.frame(data_count)
case_control_data <- casecontrolfunction(data_count,data_tumor)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.