overlapaverage: overlapaverage
In LULIU1816/TwoSLSanalysis: TwoSLSanylsis is an two-stage least squares procedure for TCGA analysis. TwoSLSanylsis can provide the estimate of causal effect with the survival data download from TCGA.
View source: R/overlapaverage.R
Description
average the repeated measures data of LUAD methylation if exisit, and concrete analysis should be made according to concrete circumstance in other cancer
Usage
1
overlapaverage(CpG,methylationLUAD)
Examples
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library("data.table")
#read methylation data
data_methy<-fread("LUSC__methylation_450__tissueTypeAll__20181024055604.txt",data.table=F,head=T) data_methy <- as.data.frame(data_methy)[,-c(2,3,4)]
methylationLUAD <- overlapaverage(CpG,methylationLUAD)
LULIU1816/TwoSLSanalysis documentation built on Nov. 18, 2019, 5:41 a.m.
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View source: R/overlapaverage.R
Description
average the repeated measures data of LUAD methylation if exisit, and concrete analysis should be made according to concrete circumstance in other cancer
Usage
1 | overlapaverage(CpG,methylationLUAD)
|
Examples
1 2 3 4 5 6 | library("data.table")
#read methylation data
data_methy<-fread("LUSC__methylation_450__tissueTypeAll__20181024055604.txt",data.table=F,head=T) data_methy <- as.data.frame(data_methy)[,-c(2,3,4)]
methylationLUAD <- overlapaverage(CpG,methylationLUAD)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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