selectexpressionsample: selectexpressionsample
In LULIU1816/TwoSLSanalysis: TwoSLSanylsis is an two-stage least squares procedure for TCGA analysis. TwoSLSanylsis can provide the estimate of causal effect with the survival data download from TCGA.
View source: R/selectexpressionsample.R
Description
select the tumor and normal tissues in expression
Usage
1
selectexpressionsample(gene_id,expressionLUAD)
Examples
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library("data.table")
#read expression data
data_normalized<-fread("LUAD__gene.normalized_RNAseq__tissueTypeAll__20181022065043.txt",data.table=F,head=T)
data_normalized <- as.data.frame(data_normalized)
gene_id <- data_normalized[, 1]
# select sample 01A,11A
selectexpressionsample(gene_id,data_normalized)
LULIU1816/TwoSLSanalysis documentation built on Nov. 18, 2019, 5:41 a.m.
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View source: R/selectexpressionsample.R
Description
select the tumor and normal tissues in expression
Usage
1 | selectexpressionsample(gene_id,expressionLUAD)
|
Examples
1 2 3 4 5 6 7 8 9 | library("data.table")
#read expression data
data_normalized<-fread("LUAD__gene.normalized_RNAseq__tissueTypeAll__20181022065043.txt",data.table=F,head=T)
data_normalized <- as.data.frame(data_normalized)
gene_id <- data_normalized[, 1]
# select sample 01A,11A
selectexpressionsample(gene_id,data_normalized)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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