partialCor: Partial correlation estimation

In LXQin/DANA: Data-driven Normalization Assessment for miRNA-Seq Data

Partial correlation estimation

Description

Partial correlation estimation using the neighborhood selection method (see Meinshausen, Buehlmann (2006)) for the estimation of the inverse covariance matrix (precision matrix)

Usage

partialCor(X, scale = TRUE)

Arguments

X	Data matrix. Size (samples x parameters): n x p. Columns should be named corresponding to marker/miRNA names.
scale	Logical if the data is scaled column-wise to mean 0 and var 1.

Value

Estimated partial correlation matrix. Shape p x p

References

Neighborhood Selection

LXQin/DANA documentation built on March 7, 2024, 3:24 a.m.