|bamtobed||Convert BAM files into BED files.|
|bedtolist||Convert a list of BED files into a list of data frames.|
|codon_usage_psite||Compute and plot the usage of the codons.|
|create_annotation||Create an annotation data frame.|
|frame_psite||Compute the number of P-sites per frame.|
|frame_psite_length||Compute the number of P-sites per frame for each read length.|
|metaheatmap_psite||Plot ribosome occupancy metaheatmap at single-nucleotide...|
|metaprofile_psite||Plot ribosome occupancy metaprofiles at single-nucleotide...|
|psite||Identify the ribosome P-site position along the reads.|
|psite_info||Updates reads information adding features associated to the...|
|psite_per_cds||Compute the number of P-sites per coding sequence.|
|region_psite||Plot percentage of P-site per transcript region.|
|rends_heat||Plot metaheatmaps of the read ends.|
|rlength_distr||Plot read length distributions.|
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