covComb_tx_deg: RSE object of RNA-seq data that serves as output for...
In LieberInstitute/qsvaR: Generate Quality Surrogate Variable Analysis for Degradation Correction
covComb_tx_deg R Documentation
RSE object of RNA-seq data that serves as output for degradation analysis
Description
This data was generated from an experiment using degraded RNA-seq samples
post-mortem brain tissue. The transcripts included are the result of the qsva
expanded framework study and will be used to remove the effect of degradation
in bulk RNA-seq data.
Format
A RangedSummarizedExperiment-class
See Also
getPCs k_qsvs getDegTx
LieberInstitute/qsvaR documentation built on June 22, 2024, 8:03 a.m.
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| covComb_tx_deg | R Documentation |
RSE object of RNA-seq data that serves as output for degradation analysis
Description
This data was generated from an experiment using degraded RNA-seq samples post-mortem brain tissue. The transcripts included are the result of the qsva expanded framework study and will be used to remove the effect of degradation in bulk RNA-seq data.
Format
A RangedSummarizedExperiment-class
See Also
getPCs k_qsvs getDegTx
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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