TxDb2GR: TxDb object to GRanges
In LihuaJulieZhu/ChIPpeakAnno: Batch annotation of the peaks identified from either ChIP-seq, ChIP-chip experiments or any experiments resulted in large number of chromosome ranges
Description
convert TxDb object to GRanges
Usage
1
TxDb2GR(ranges, feature, OrganismDb)
Arguments
ranges
an Txdb object
feature
feature type, could be geneModel, gene, exon,
transcript, CDS, fiveUTR, threeUTR, microRNA, and tRNA
OrganismDb
org db object
LihuaJulieZhu/ChIPpeakAnno documentation built on Aug. 5, 2020, 12:02 a.m.
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Description
convert TxDb object to GRanges
Usage
1 | TxDb2GR(ranges, feature, OrganismDb)
|
Arguments
ranges |
an Txdb object |
feature |
feature type, could be geneModel, gene, exon, transcript, CDS, fiveUTR, threeUTR, microRNA, and tRNA |
OrganismDb |
org db object |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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