Liuy12/MBDDiff: MBDDiff for processing MBDcap-seq datasets

Here we presented a novel algorithm, termed MBDDiff, implemented as an R package that is designed specifically for processing MBDCap-seq datasets. MBDDiff contains three modules: quality assessment of datasets and quantification of DNA methylation; determination of differential methylation of promoter regions; and visualization functionalities.

Getting started

Package details

AuthorYuanhang Liu
Bioconductor views CpGIsland DNAMethylation ExperimentalDesign QualityControl Sequencing Software Visualization
MaintainerYuanhang Liu <>
LicenseGPL (>=3)
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
Liuy12/MBDDiff documentation built on May 7, 2019, 2 p.m.