Description Usage Arguments Value Author(s) References See Also Examples

Calculate TPM based on user-specifed count matrix and transcript length. This can be generalized to any certain genomic interval instead of limiting to transcript.

1 | ```
CalculateTPM(dataMat, gaplength)
``` |

`dataMat` |
a matrix or data.frame of count datasets |

`gaplength` |
a integer vector that contains length information for each row of dataMat. |

A matrix or data.frame of TPM normalized values

Yuanhang Liu

https://github.com/Liuy12/MBDDiff

1 2 | ```
data(PromoterCount)
PromoterCount_TPM <- CalculateTPM(Promoter, Promoterlength)
``` |

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