GetChromLength: Retrive chromsome length information from UCSC database
In Liuy12/MBDDiff: MBDDiff for processing MBDcap-seq datasets
Description
Usage
Arguments
Details
Value
References
Examples
Description
Retrive chromsome length information from UCSC MySQL database
Usage
1
GetChromLength(organism)
Arguments
organism
The accession code of organisms to UCSC database.
Details
To get a list of availabe organisms in UCSC database, see ShowAvailableOrg
Value
A data.frame that contains chromesome information:
chrom
chromsome number
size
chromsome length
References
https://github.com/Liuy12/MBDDiff
Examples
1
GetChromLength('hg19')
Liuy12/MBDDiff documentation built on May 7, 2019, 2 p.m.
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Description Usage Arguments Details Value References Examples
Description
Retrive chromsome length information from UCSC MySQL database
Usage
1 | GetChromLength(organism)
|
Arguments
organism |
The accession code of organisms to UCSC database. |
Details
To get a list of availabe organisms in UCSC database, see ShowAvailableOrg
Value
A data.frame that contains chromesome information:
chrom |
chromsome number |
size |
chromsome length |
References
https://github.com/Liuy12/MBDDiff
Examples
1 | GetChromLength('hg19')
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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