get_used_pathways: Extracts the pathways detected as signature during a...
In LucaGiudice/Simpati: Pathway-based classifier exploits patient similarity network paradigm
Description
Usage
Arguments
Value
View source: R/funs_enrichment.R
Description
After Simpati has classified patients, this function can take Simpati's classification results
and provide the pathways detected as signatures
Usage
1
get_used_pathways(PSNs_info_te, vars_list)
Arguments
PSNs_info_te
Output of the predict_pats function
vars_list
Variable list of the Simpati's run that has produced the cons_res oject
Value
Return the feature list of the signature pathways used in the classification
LucaGiudice/Simpati documentation built on Jan. 27, 2022, 11:42 p.m.
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Description Usage Arguments Value
View source: R/funs_enrichment.R
Description
After Simpati has classified patients, this function can take Simpati's classification results and provide the pathways detected as signatures
Usage
1 | get_used_pathways(PSNs_info_te, vars_list)
|
Arguments
PSNs_info_te |
Output of the predict_pats function |
vars_list |
Variable list of the Simpati's run that has produced the cons_res oject |
Value
Return the feature list of the signature pathways used in the classification
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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