echogramPlot: Plot a matrix of a filtered echogram.

In LuisLauM/oXim: Oxycline Index from Matrix Echograms

Description

This function takes an echogram matrix and plot it.

Usage

## Default S3 method:
echogramPlot(x, colEchogram = "colPalette", ...)

echogramPlot(x, colEchogram = "colPalette", ...)

## S3 method for class 'matrix'
echogramPlot(x, ...)

Arguments

x	Object of class oxyclineData, echoData or matrix with information for make an echogram plot. If x is a matrix, column names must indicate the time and row names, the depth.
colEchogram	Pallete of colours to plot the echograms. If NULL (default) the system will use the same combination used on object colPallete.
...	Extra arguments passed to echogramPlot function.

Details

Typically, 'echogramPlot' can be applied to echogram matrix object, however it also may use 'echoData' and 'oxyclineData' objects, as a method.

Examples

fileMode <- list(fish38_file   = system.file("extdata", "fish38.mat", package = "oXim"),
                 fluid120_file = system.file("extdata", "fluid120.mat", package = "oXim"),
                 blue38_file   = system.file("extdata", "blue38.mat", package = "oXim"))
echoData <- readEchograms(fileMode = fileMode)
echogramPlot(x = echoData)

LuisLauM/oXim documentation built on May 7, 2019, 2:03 p.m.