getMutationDetails_Dataframe: getMutationDetails_Dataframe

In MD-Anderson-Bioinformatics/GeneSurvey: MD Anderson Gene Survey

Description

Get a dataframe for a given gene with individual mutations noted.

Usage

getMutationDetails_Dataframe(theGene,
theZipFile = "/geneSurveyData/GeneSurvey.zip",
theVerboseFlag = FALSE)

Arguments

theGene	Gene symbol corresponding with results from getNames_Mutation_Details results.
theZipFile	Default: For DQS Servers. If you are on a server where the GENE_REPORT directory is on a different path, you can pass in a value to override the default of "/geneSurveyData/GeneSurvey.zip". NOTE: This is a subdirectory of the main GENE_REPORT directory.
theVerboseFlag	Default: FALSE. TRUE means write all output, which can be very verbose.

Value

Dataframe with columns being headers and each row an individual mutation.

Examples

#See examples in tests directory in the install.

MD-Anderson-Bioinformatics/GeneSurvey documentation built on May 7, 2019, 2:04 p.m.