chmColOrder-method: Set the column order of data shown in a NGCHM.

In MD-Anderson-Bioinformatics/NGCHM-R: Next Generation Clustered Heat Maps

Set the column order of data shown in a NGCHM.

Description

This function sets the column order for a NG-CHM (Next-Generation Clustered Heat Map) object.

Usage

chmColOrder(chm) <- value

## S4 replacement method for signature 'ngchm,optDendrogram'
chmColOrder(chm) <- value

Arguments

chm	An object of class 'ngchm'.
value	An object of class 'optDendrogram' or 'file' specifying the new column order. If value is NULL, the labels will be displayed in the same order they are found in the first data layer. If value is a character vector, the labels will be displayed in that order. If value is a dendrogram, the labels displayed in the order they occur in a depth first traversal of the tree.

Value

An updated 'ngchm' object with the new column order.

See Also

"chmRowOrder<-"

MD-Anderson-Bioinformatics/NGCHM-R documentation built on April 1, 2024, 12:34 p.m.