makeDataParser: convert phyloseq object into the format of input of the...
In MaStatLab/LTN: Fit LTN model to microbiome count data
Description
convert phyloseq object into the format of input of the LTN-based mixed-effects model sampler
Usage
1
makeDataParser(formula, data, test_baseline)
Arguments
formula
a one-sided lme4 type formula, where the first variable is the group being tested
data
a phyloseq object with an OTU table and a tree
test_baseline
which level of the groups to be used as baseline
MaStatLab/LTN documentation built on Feb. 4, 2022, 10:35 p.m.
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Description
convert phyloseq object into the format of input of the LTN-based mixed-effects model sampler
Usage
1 | makeDataParser(formula, data, test_baseline)
|
Arguments
formula |
a one-sided lme4 type formula, where the first variable is the group being tested |
data |
a phyloseq object with an OTU table and a tree |
test_baseline |
which level of the groups to be used as baseline |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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