determine.group.members: Determine group membership

Description Usage Arguments Value See Also

Description

Determine group membership

Usage

1
2
determine.group.members(labels, group.scores, peak.scores, test.classes = c(1,
  -1), fdr.cutoff = 0.05, no.cores = 1)

Arguments

labels

Training labels (Should be +1/-1)

group.scores

Matrix of group scores

peak.scores

Matrix of example group scores

test.classes

Classes to determine group members

fdr.cutoff

q-value from examples of other class

no.cores

No of cores for parallel processing

Value

group.members

Binary matrix of size no. of sequences x no. of groups indicating group membership

group.pvals

FDR-corrected p-value matrix of size no. of sequences x no. of groups

See Also

run.group.lasso


ManuSetty/SeqGL documentation built on May 7, 2019, 2:46 p.m.