findxnextneighbors: Find next neighbors of transcription factors in identified...
In MarenS2/pwOmics: Pathway-based data integration of omics data
Description
Usage
Arguments
Value
Description
Find next neighbors of transcription factors in identified pathways.
Produces a list of x next neighbors for each transcription factor in the
pathway.
Usage
1
findxnextneighbors(data_omics, pws_morex_TFs, pwxTFs, order_neighbors)
Arguments
data_omics
OmicsData object.
pws_morex_TFs
list of transcription factors in identified pathways.
pwxTFs
numeric variable of pathway currently investigated
(from pws_morexTFs).
order_neighbors
integer specifiying the order of the neighborhood:
order 1 is TF plus its immediate neighbors.
Value
list of x next neighbors for each TF in the pathway.
MarenS2/pwOmics documentation built on May 17, 2019, 9:10 a.m.
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Description Usage Arguments Value
Description
Find next neighbors of transcription factors in identified pathways.
Produces a list of x next neighbors for each transcription factor in the pathway.
Usage
1 | findxnextneighbors(data_omics, pws_morex_TFs, pwxTFs, order_neighbors)
|
Arguments
data_omics |
OmicsData object. |
pws_morex_TFs |
list of transcription factors in identified pathways. |
pwxTFs |
numeric variable of pathway currently investigated (from pws_morexTFs). |
order_neighbors |
integer specifiying the order of the neighborhood: order 1 is TF plus its immediate neighbors. |
Value
list of x next neighbors for each TF in the pathway.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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