identRegulators: Identify overlapping upstream regulators of x transcription...

Description Usage Arguments Value

Description

Identify overlapping upstream regulators of x transcription factors

Usage

1
identRegulators(pws_morex_TFs, data_omics, order_neighbors, noTFs_inPW)

Arguments

pws_morex_TFs

list of transcription factors in identified pathways.

data_omics

OmicsData object.

order_neighbors

integer specifiying the order of the neighborhood: order 1 is TF plus its immediate neighbors.

noTFs_inPW

integer; only regulators in upstream pathways with more than this number of TFs are identified.

Value

list of possible proteomic regulators.


MarenS2/pwOmics documentation built on May 17, 2019, 9:10 a.m.