identTFTGsinPWs: Prepare OmicsData object for pathway information.
In MarenS2/pwOmics: Pathway-based data integration of omics data
Description
Usage
Arguments
Value
Description
This function identifies the TFs in the pathway genes and determines their
target genes on basis of the given (chosen) TF-target database(s).
Usage
1
identTFTGsinPWs(data_omics, temp_genelist)
Arguments
data_omics
OmicsData object.
temp_genelist
dataframe of unique gene IDs in PWs.
Value
list with first element being a genelist of the pathways and second
being a target gene list of TFs.
MarenS2/pwOmics documentation built on May 17, 2019, 9:10 a.m.
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Description Usage Arguments Value
Description
This function identifies the TFs in the pathway genes and determines their target genes on basis of the given (chosen) TF-target database(s).
Usage
1 | identTFTGsinPWs(data_omics, temp_genelist)
|
Arguments
data_omics |
OmicsData object. |
temp_genelist |
dataframe of unique gene IDs in PWs. |
Value
list with first element being a genelist of the pathways and second being a target gene list of TFs.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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