Description Usage Arguments Value
Select tuning parameters for Markov Chain Monte Carlo (MCMC) sampling based on the size of the gene sets
1 2 | mcmc_tuning(mut_data, mut_rate, num_iters = 1000, burning = 0,
mcmc_tuning, tg_lambda, seed = -1, range = c(2:3))
|
mut_data |
Mutation table created using MADGIC algorithm. |
mut_rate |
Mutation rate table create uisng MADGIC algorithm. |
num_iters |
Number of MCMC samples. |
burning |
Number of Burn-in samples. |
mcmc_tuning |
MCMC initial tuning parameter, . |
tg_lambda |
lambda |
seed |
Seed for RGN. |
tuning parameter after the selection
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