rp_raw: Fake data set of respiratory panel data
In MartinHoldrege/turnr: Normalization of Test Utilization Rate
Description
Simulated data set of respiratory panel data (rows of fake Gastro Intestinal
data also included). Raw input data for the turnr package should mimic
the structure of this dataset
Usage
1
Format
A data frame with 16 variables:
- RunDataID
unique identifier of that patient test
- StartTime
Approximate time of the test
- PouchTitle
Type of panel, either 'Respiratory_Panel' or
'Gastro_Intestinal'
- ResultType
This is the assay name within the test
- TargetName
Name of pathogen or control
- TargetShortName
Short name for pathogen (left as NA here)
- TargetResult
in this data set 'Pass' for controls and 'Positive'
for pathogens, no negatives included here
- InstrumentSerialNumber
Unique identifier of the instrument
- InstrumentVersion
type of instrument
- AssayName
This is the assay used to call determine the
pathogen or target
- AssayResult
Assay Result, only positives are shown in this datasheet
- Country
Only U.S. in this fake dataset
- Region
State
- ZipCode
Zip codes used here may not be real
- FlaggedAsValidation
Flag of whether test likely a validation (0, 1)
- SiteID
Unique ID of the lab
...
MartinHoldrege/turnr documentation built on May 16, 2020, 10:39 a.m.
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Description
Simulated data set of respiratory panel data (rows of fake Gastro Intestinal data also included). Raw input data for the turnr package should mimic the structure of this dataset
Usage
1 |
Format
A data frame with 16 variables:
- RunDataID
unique identifier of that patient test
- StartTime
Approximate time of the test
- PouchTitle
Type of panel, either 'Respiratory_Panel' or 'Gastro_Intestinal'
- ResultType
This is the assay name within the test
- TargetName
Name of pathogen or control
- TargetShortName
Short name for pathogen (left as NA here)
- TargetResult
in this data set 'Pass' for controls and 'Positive' for pathogens, no negatives included here
- InstrumentSerialNumber
Unique identifier of the instrument
- InstrumentVersion
type of instrument
- AssayName
This is the assay used to call determine the pathogen or target
- AssayResult
Assay Result, only positives are shown in this datasheet
- Country
Only U.S. in this fake dataset
- Region
State
- ZipCode
Zip codes used here may not be real
- FlaggedAsValidation
Flag of whether test likely a validation (0, 1)
- SiteID
Unique ID of the lab
...
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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