get_threshold: Determine threshold used on the data in data frame
In Meiomap/SureTypeSCR: Library for (single-cell) SNP array processing
Description
Usage
Arguments
Value
View source: R/get_threshold.R
Description
Determine score cutoff that was applied on the data - that is all genotypes below the returned value are no-calls.
Usage
1
get_threshold(.data,col='score')
Arguments
.data
basic data frame compatible with output from scbasic(.)
col
column name with score - effective columns GenCall's score (scode), SureTypeSC's score (rfgda_score) or single layer SureTypeSC's score (rf_score)
Value
returns float
Meiomap/SureTypeSCR documentation built on Dec. 17, 2021, 3:22 a.m.
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Description Usage Arguments Value
View source: R/get_threshold.R
Description
Determine score cutoff that was applied on the data - that is all genotypes below the returned value are no-calls.
Usage
1 | get_threshold(.data,col='score')
|
Arguments
.data |
basic data frame compatible with output from |
col |
column name with score - effective columns GenCall's score ( |
Value
returns float
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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