Man pages for MetClassNet/MetClassNetR
Create and analize networks built from metabolomics Data
| buildExpNet | Build experimental networks |
| calculateMultiLayerStats | Calculate some statistics of the multi-layer network |
| calculateOverlap | Calculate, create a table and plot statistics |
| calculNetStats | Calculate, create a table and plot statistics |
| dot-mapMetToGSMN_inchikey | Map features to metabolites if the InChIKey is the same. |
| dot-mapMetToGSMN_metabolomics2network | Map the experimental nodes to GSMN nodes using... |
| exportAttributes2gml | Create a network and export to gml from adjacency list |
| exportNet2gml | Create a network and export to gml from adjacency list |
| getOverlappingNodes | Get the overlapping nodes |
| loadInputData | Load the input data |
| makeMultiLayer | Make a multi-layer network |
| makeToyNet | Generate toy networks |
| mapMetToGSMN | Map the experimental nodes to GSMN nodes |
| printStatsPlots | Calculate, create a table and plot statistics |
| qfeat_homol | Homologue series extraction from QFeatures input |
| qfeat_statistical | Create a list of correlation matrices from QFeatures input |
| qfeat_structural | Create m/z difference adjacency matrix from QFeatures input |
| readmzTab | place holder for mzTab |
| readNet | Read all the networks stored in a given directory |
| spec_molNetwork | Calculate molecular network from MS2 data |
| writeMultiLayer | Save and visualize multi-layer network |
