Description Usage Arguments Details Value Author(s) Examples
This function is to convert a gene-gene interaction table to gene network matrix, which is an input of DIGREscore function.
1 | constGeneNet(geneNet)
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geneNet |
a data frame contains gene-gene interaction. See 'geneNetLymph' for example. |
Input gene-gene interaction table should have two columns with gene SYMBOL names. Each raw represents two connected genes. The interaction is regarded as undirected.
a matrix of gene connectivity matrix
Jichen Yang, Sangin Lee, Minzhe Zhang(zenroute.mzhang@gmail.com)
1 | geneNetLymph.mat <- constGeneNet(geneNet = geneNetLymph)
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