fetch_aggregated_data_per_instrument_for_period: Fetch aggregated data for all instruments for the specified...
In Molmed/projmanr: R package for interfacing with the ProjMan database at the SNP&SEQ Technology Platform
Description
Usage
Arguments
Value
Description
Fetch aggregated data for all instruments for the specified period
Usage
1
2
fetch_aggregated_data_per_instrument_for_period(connection, start_date,
end_date)
Arguments
connection
a connection object
start_date
on format '2017-01-01' inclusive
end_date
on format '2017-12-31' exclusive
Value
A data frame with aggregate data for each instrument
month year instrument giga_bases mean_pct_q30 cummulative_giga_bases
<fctr> <fctr> <fctr> <dbl> <dbl> <dbl>
1 01 2016 HiSeq 3 136.2203 0.7901464 136.2203
2 03 2016 HiSeq 3 784.2160 0.8173106 920.4363
3 04 2016 HiSeq 3 752.7554 0.8559456 1673.1917
4 05 2016 HiSeq 3 235.9002 0.7706029 1909.0919
5 06 2016 HiSeq 3 500.5259 0.8773095 2409.6177
6 07 2016 HiSeq 3 1040.6433 0.8605515 3450.2611
7 08 2016 HiSeq 3 489.9396 0.7885864 3940.2007
8 11 2016 HiSeq 3 103.4723 0.9756829 4043.6730
9 02 2016 HiSeq 4 765.1809 0.9520556 765.1809
10 03 2016 HiSeq 4 914.8843 0.8691078 1680.0653
Molmed/projmanr documentation built on May 7, 2019, 4:59 p.m.
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Description Usage Arguments Value
Description
Fetch aggregated data for all instruments for the specified period
Usage
1 2 | fetch_aggregated_data_per_instrument_for_period(connection, start_date,
end_date)
|
Arguments
connection |
a connection object |
start_date |
on format '2017-01-01' inclusive |
end_date |
on format '2017-12-31' exclusive |
Value
A data frame with aggregate data for each instrument month year instrument giga_bases mean_pct_q30 cummulative_giga_bases <fctr> <fctr> <fctr> <dbl> <dbl> <dbl> 1 01 2016 HiSeq 3 136.2203 0.7901464 136.2203 2 03 2016 HiSeq 3 784.2160 0.8173106 920.4363 3 04 2016 HiSeq 3 752.7554 0.8559456 1673.1917 4 05 2016 HiSeq 3 235.9002 0.7706029 1909.0919 5 06 2016 HiSeq 3 500.5259 0.8773095 2409.6177 6 07 2016 HiSeq 3 1040.6433 0.8605515 3450.2611 7 08 2016 HiSeq 3 489.9396 0.7885864 3940.2007 8 11 2016 HiSeq 3 103.4723 0.9756829 4043.6730 9 02 2016 HiSeq 4 765.1809 0.9520556 765.1809 10 03 2016 HiSeq 4 914.8843 0.8691078 1680.0653
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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