fetch_information_for_project: Fetches all information about a project and returns on the...
In Molmed/projmanr: R package for interfacing with the ProjMan database at the SNP&SEQ Technology Platform
Description
Usage
Arguments
Value
Description
Fetches all information about a project and returns on the format:
Usage
1
fetch_information_for_project(connection, project_name)
Arguments
connection
a connection object
project_name
the name of the project to fetch data for
Value
A data frame with all information for the project on the following format:
flowcell_id project_id sample_name tag_seq lane_num read_num cycles pct_lane pf_clusters pct_q30 pct_tag_err library_name mean_q runfolder_name run_date
1 HVHL3CCXX PA-1029 LR058 ACTTGA 1 1 151 13.176618 61628805 95.73171 3.032265 SX717_LR058.v1 40.09754 160816_ST-E00274_0100_BHVHL3CCXX 2016-08-16
2 HVHL3CCXX PA-1029 LR284 TTAGGC 1 1 151 10.769056 50368320 95.62205 3.079384 SX717_LR284.v1 40.053861 160816_ST-E00274_0100_BHVHL3CCXX 2016-08-16
Molmed/projmanr documentation built on May 7, 2019, 4:59 p.m.
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Description Usage Arguments Value
Description
Fetches all information about a project and returns on the format:
Usage
1 | fetch_information_for_project(connection, project_name)
|
Arguments
connection |
a connection object |
project_name |
the name of the project to fetch data for |
Value
A data frame with all information for the project on the following format: flowcell_id project_id sample_name tag_seq lane_num read_num cycles pct_lane pf_clusters pct_q30 pct_tag_err library_name mean_q runfolder_name run_date 1 HVHL3CCXX PA-1029 LR058 ACTTGA 1 1 151 13.176618 61628805 95.73171 3.032265 SX717_LR058.v1 40.09754 160816_ST-E00274_0100_BHVHL3CCXX 2016-08-16 2 HVHL3CCXX PA-1029 LR284 TTAGGC 1 1 151 10.769056 50368320 95.62205 3.079384 SX717_LR284.v1 40.053861 160816_ST-E00274_0100_BHVHL3CCXX 2016-08-16
R Package Documentation
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We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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