Transform RNA-Seq count data so that variance due to biological noise plus its count-based nature is stable across genes with different average expression levels. This takes the form of a log transformation which is moderated for low counts. Transforming data in this way makes many statistical and machine learning techniques applicable. A Shiny report function showing diagnostic plots based on the transformed data is also provided.
Package details |
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Maintainer | Paul Harrison <paul.harrison@monash.edu> |
License | LGPL-2.1 | file LICENSE |
Version | 1.0.4 |
URL | https://github.com/MonashBioinformaticsPlatform/varistran |
Package repository | View on GitHub |
Installation |
Install the latest version of this package by entering the following in R:
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