shiny_plot: Shiny plot.

In MonashBioinformaticsPlatform/varistran: Variance Stabilizing Transformations appropriate for RNA-Seq expression data

Description

Convert a function that produces a plot into a Shiny app.

Usage

shiny_plot(
  callback = NULL,
  width = 500,
  height = 500,
  dlname = "plot",
  prefix = "",
  ...
)

shiny_plot_ui(id, width = 500, height = 500, ...)

shiny_plot_server(input, output, session, callback, dlname = "plot")

Arguments

callback	Function to produce the plot. In shiny_plot, this takes one argument, "env" (see composable_shiny_app). In shiny_plot_server, it takes no arguements.
width	Default plot width.
height	Default plot height.
dlname	Filename (without extension) if plot is downloaded.
prefix	Prefix for variables in environment for composable shiny app.
...	Extra arguments to shiny_plot and shiny_plot_ui are passed on to plotOutput, for example brushing options.
id	Id for shiny module.
input	Supplied by shiny::callModule.
output	Supplied by shiny::callModule.
session	Supplied by shiny::callModule.

Details

shiny_plot is the varistran-style composable app object. shiny_plot_ui and shiny_plot_server are appropriate for the normal Shiny module system.

Value

shiny_plot() returns a composable shiny.appobj.

Functions

• shiny_plot_ui: UI part of Shiny module.

• shiny_plot_server: server part of Shiny module, to be invoked from a server function with callModule.

Author(s)

Paul Harrison

MonashBioinformaticsPlatform/varistran documentation built on March 21, 2020, 3:20 p.m.