anatSummaries: anatSummaries

In Mouse-Imaging-Centre/RMINC: Statistical Tools for Medical Imaging NetCDF (MINC) Files

anatSummaries

Description

These functions are used to compute the mean, standard deviation, sum, or variance of every region in an anat structure.

Usage

anatMean(anat)

anatSum(anat)

anatVar(anat)

anatSd(anat)

Arguments

anat	anat structure.

Value

out: The output will be a single vector containing as many elements as there are regions in the input variable.

Functions

• anatMean: mean

• anatSum: sum

• anatVar: variance

• anatSd: standard deviation

Examples

## Not run: 
getRMINCTestData() 
gf = read.csv("/tmp/rminctestdata/CIVET_TEST.csv")
gf = civet.getAllFilenames(gf,"ID","TEST","/tmp/rminctestdata/CIVET","TRUE","1.1.12")
gf = civet.readAllCivetFiles("/tmp/rminctestdata/AAL.csv",gf)
vm <- anatMean(gf$lobeThickness)

## End(Not run)

Mouse-Imaging-Centre/RMINC documentation built on Nov. 12, 2022, 1:50 p.m.