civet.CreateBrainViewROI | R Documentation |
Create a brainview file of a specific ROI
civet.CreateBrainViewROI( atlasFile, atlasVertices, region, civetVersion = "1.1.12" )
atlasFile |
File with Atlas label (string-label(int)) mappings |
atlasVertices |
File with vertex label(int) mappings |
region |
Region to plot -> Must match name in atlas file exactly |
civetVersion |
Version of CIVET |
Create a .txt file that can be overlaid unto the model template (usually in the CIVET models directory) Currently only CIVET version 1.1.12 is supported.
civet.CreateBrainViewFile
## Not run: getRMINCTestData() civet.CreateBrainViewROI("/tmp/rminctestdata/AAL.csv", "/tmp/rminctestdata/AAL_atlas_left.txt", "Left Insula") q() #(The .txt file is written in the working directory and can be viewed via the command) #brain-view2 $CIVET_DIR/models/surf_reg_model_left.obj ./LeftInsula.txt ## End(Not run)
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.