check.list.format: Check format of dlist

In Mystilivia/SDjoygret: Testing R Package

Description

Chech if the list elements are data.table or data.frame, id rownames [[1]] and [[2]] are identical (for data.frame only, use first column as row id with data.table), and if colnames [[1]] are identical to rownames [[3]]. Check also dataframes dimension to check consistency and propose to transform data.frame to data.table.

Usage

check.list.format(dlist, rownamesL = F, data.tableL = F, debugL = F)

Arguments

dlist	Three levels list with [[1]] Datamatrix, [[2]] SamplesMetadata, [[3]] VariableMetadata.
rownamesL	Does data.frame store Rows ID as rownames ?
debugL	Logical to show debugging messsages
tibbleL	Logical to convert data.frame and data.table dlist to tibbles.

Value

Print result of check as character and return the dlist (or converted dlist) if format is ok

Examples

check.list.format()

Mystilivia/SDjoygret documentation built on May 7, 2019, 5:17 p.m.