SD_batch_set: SD_batch_set

In Mystilivia/SDjoygret: Testing R Package

Description

This function separate .mzXML file list by batch. Useful when you use directory for your classes and want to do separate xcms analysis by another grouping factor like batch sequences.

Usage

SD_batch_set(Batch.files = Batch.files, xcmsSet_param = list(method =
  "centWave", ppm = 7, peakwidth = c(4, 20), snthresh = 10, prefilter = c(4,
  10000), mzdiff = -0.001, fitgauss = FALSE, nSlaves = 4))

Arguments

Batch.files	List returned by SD_mass_batch with files for each batch.
xcmsSet_param	xcmsSet parameters (can be any parameters formated like this : c(method="centWave", "ppm=7))

Mystilivia/SDjoygret documentation built on May 7, 2019, 5:17 p.m.