matches-methods: matches
In NBISweden/genecovr: Gene body coverage analysis to evaluate genome assemblies
matches R Documentation
matches
Description
Get matches from an alignment.
Get mismatches from an alignment.
Get matches that are parts of repeats from an alignment.
Usage
matches(x, ...)
mismatches(x, ...)
repmatches(x, ...)
## S4 method for signature 'AlignmentPairs'
matches(x)
## S4 method for signature 'AlignmentPairs'
mismatches(x)
## S4 method for signature 'AlignmentPairs'
repmatches(x)
Arguments
x
Object representation of a sequence alignment
...
Additional argument list
Value
numeric
numeric
numeric
NBISweden/genecovr documentation built on Jan. 26, 2024, 7:15 a.m.
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| matches | R Documentation |
matches
Description
Get matches from an alignment.
Get mismatches from an alignment.
Get matches that are parts of repeats from an alignment.
Usage
matches(x, ...)
mismatches(x, ...)
repmatches(x, ...)
## S4 method for signature 'AlignmentPairs'
matches(x)
## S4 method for signature 'AlignmentPairs'
mismatches(x)
## S4 method for signature 'AlignmentPairs'
repmatches(x)
Arguments
x |
Object representation of a sequence alignment |
... |
Additional argument list |
Value
numeric
numeric
numeric
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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