query-methods: Retrieve query from object

In NBISweden/genecovr: Gene body coverage analysis to evaluate genome assemblies

Retrieve query from object

Description

For any object with a query slot retrieve the query object.

For any object with a query slot set the query.

Usage

query(x, ...)

query(x) <- value

## S4 method for signature 'AlignmentPairs'
query(x)

## S4 replacement method for signature 'AlignmentPairs,GRanges'
query(x) <- value

Arguments

x	object representing an alignment
...	Additional arguments
value	object representing a query

Value

query object

object representing an alignment with an updated query slot

NBISweden/genecovr documentation built on Jan. 26, 2024, 7:15 a.m.