draw_heatmap: Draw sample-to-sample heatmap

In NCBI-Hackathons/Integrating-HLA-typing-methods-and-RNA-seq: HLA typing clustering and visualization based on specific similarity metrics

Description

Create and draw a sample-to-sample heatmap using the metric distances.

Usage

draw_heatmap(hlaMetric, ...)

Arguments

hlaMetric	an object of class hlaMetric that contain the distance between samples.
...	arguments passed to the Heatmap method

Value

A Heatmap-class object.

Author(s)

Astrid Deschênes, Pascal Belleau

Examples

## Load example dataset
data(demoHLADataset)

## Calculate Hamming distance metric
hammingMetric <- calculateHamming(demoHLADataset)

## Create sample-to-sample heatmap
draw_heatmap(hammingMetric)

NCBI-Hackathons/Integrating-HLA-typing-methods-and-RNA-seq documentation built on Nov. 23, 2019, 1:57 a.m.