API for NCBI-Hackathons/clustifyR
Classification of Cell Types in Single-Cell RNA Sequencing Data

Global functions
average_clusters Man page Source code
binarize_expr Man page Source code
calc_similarity Source code
clustify Man page Source code
clustify.default Man page Source code
clustify.seurat Man page Source code
clustifyR Man page
clustifyR-package Man page
clustifyr_methods Man page
compare_lists Man page Source code
compute_bulk_score Source code
compute_centroid Source code
compute_mean_expr Source code
cosine Man page Source code
getPCAGenes Man page Source code
get_best_str Man page Source code
get_common_elements Man page Source code
get_similarity Source code
get_vargenes Man page Source code
importance_heatmap Man page Source code
kl_divergence Man page Source code
matrixize_markers Man page Source code
pbmc4k_avg Man page
pbmc4k_markers Man page
pbmc4k_markers_M3Drop Man page
pbmc4k_matrix Man page
pbmc4k_meta Man page
pbmc4k_vargenes Man page
pbmc5_markers Man page
pbmc5_matrix Man page
pbmc5_meta Man page
pbmc_bulk_matrix Man page
pbmc_pca Man page
percent_clusters Man page Source code
permute_similarity Source code
plot_call Man page Source code
plot_cor Man page Source code
plot_gene Man page Source code
plot_tsne Man page Source code
pretty_palette Man page
reduce_expr_matrix Man page Source code
refine_clusters Man page Source code
run_gsea Man page Source code
use_seurat_comp Man page Source code
vector_similarity Man page Source code
NCBI-Hackathons/clustifyR documentation built on Sept. 30, 2018, 9:58 a.m.