Files in NZRLIC/RLPlots
Graphical outputs for New Zealand rock lobster stock assessment
.Rbuildignore
.gitignore
.travis.yml
DESCRIPTION
LICENSE
Makefile
NAMESPACE
R/Arniplot.R
R/Bio.R
R/BioOptions.R
R/Bio_posterior.R
R/CDF_posterior.R
R/CPUE.R
R/CPUEOptions.R
R/CPUE_posterior.R
R/CR.R
R/CROptions.R
R/CR_posterior.R
R/Catches.R
R/DDgrowth.R
R/Density_posterior.R
R/Erate.R
R/First.lib.R
R/LF.R
R/LFOptions.R
R/LFzero.R
R/MCMC.All.R
R/MCMCOptions.R
R/MPD.All.R
R/MPE_rules.R
R/Mature.R
R/Mature_posterior.R
R/MeanSize.R
R/Merge_posterior.R
R/Merge_psv.R
R/Moult.R
R/Multichain.All.R
R/POO.R
R/POO_posterior.R
R/PRI.R
R/PRIOptions.R
R/Palette.R
R/PeriodToFishingYear.R
R/PeriodToSeason.R
R/PlotOptions.R
R/PlotType.R
R/QQpost.R
R/QQpostLFresid.R
R/Rec_posterior.R
R/Rect.R
R/RunningAvgShort.R
R/SEXROptions.R
R/SPBrect.R
R/SP_posterior.R
R/SR_posterior.R
R/Select.R
R/Select_posterior.R
R/Snail.R
R/TACC.R
R/Tag.R
R/TagOptions.R
R/TraceHisto.R
R/Trace_posterior.R
R/Trajectories.All.R
R/Trajectories.Basic.R
R/crosscorrelation.plot.R
R/cumulative.quantile.R
R/ggMCMC.R
R/mod.R
R/moving.average.R
R/mpeview.bypar.r
R/mpeview.r
R/panel.cor.R
R/read.mpe.pars.R
R/read.psv.R
R/read.sims.sum.R
R/rule_projection.R
R/sexRatio.R
R/theme_lobview.R
R/zzz.R
README.md
examples/viewer2014.R
man/Bio.Rd
man/BioOptions.Rd
man/Bio_posterior.Rd
man/CDF_posterior.Rd
man/CPUE.Rd
man/CPUEOptions.Rd
man/CPUE_posterior.Rd
man/CR.Rd
man/CROptions.Rd
man/CR_posterior.Rd
man/Catches.Rd
man/DDgrowth.Rd
man/Density_posterior.Rd
man/Erate.Rd
man/LF.Rd
man/LFOptions.Rd
man/LFzero.Rd
man/MCMC.All.Rd
man/MCMCOptions.Rd
man/MPD.All.Rd
man/MPE_rules.Rd
man/Mature.Rd
man/Mature_posterior.Rd
man/MeanSize.Rd
man/Merge_posterior.Rd
man/Merge_psv.Rd
man/Moult.Rd
man/Multichain.All.Rd
man/POO.Rd
man/POO_posterior.Rd
man/PRI.Rd
man/PRIOptions.Rd
man/PeriodToFishingYear.Rd
man/PeriodToSeason.Rd
man/PlotOptions.Rd
man/PlotType.Rd
man/QQpost.Rd
man/QQpostLFresid.Rd
man/Rec_posterior.Rd
man/Rect.Rd
man/RunningAvgShort.Rd
man/SEXROptions.Rd
man/SPBrect.Rd
man/SP_posterior.Rd
man/SR_posterior.Rd
man/Select.Rd
man/Select_posterior.Rd
man/Snail.Rd
man/TACC.Rd
man/Tag.Rd
man/TagOptions.Rd
man/TraceHisto.Rd
man/Trace_posterior.Rd
man/Trajectories.All.Rd
man/Trajectories.Basic.Rd
man/cbPalette1.Rd
man/cbPalette2.Rd
man/crosscorrelation.plot.Rd
man/cumulative.quantile.Rd
man/mod.Rd
man/moving_average.Rd
man/mpeview.Rd
man/mpeview.bypar.Rd
man/panel.cor.Rd
man/read.mpe.pars.Rd
man/read.psv.Rd
man/read.sims.sum.Rd
man/rule_projection.Rd
man/sexRatio.Rd
man/theme_lobview.Rd
tests/CRA1-script.R
tests/CRA3-script.R
tests/CRA3/CRA3-1
tests/CRA3/CRA3-1TagResids.out
tests/CRA3/CRA3-2
tests/CRA3/CRA3-2TagResids.out
tests/CRA3/CRA3Ball.out
tests/CRA3/CRA3Base.dat
tests/CRA3/CRA3Biomass.out
tests/CRA3/CRA3CPUEResids.out
tests/CRA3/CRA3CPUEpost.out
tests/CRA3/CRA3CPUErespost.out
tests/CRA3/CRA3CRResids.out
tests/CRA3/CRA3CRpost.out
tests/CRA3/CRA3CRrespost.out
tests/CRA3/CRA3Catches.out
tests/CRA3/CRA3Erate.out
tests/CRA3/CRA3FrancisLFs.out
tests/CRA3/CRA3LF1post.out
tests/CRA3/CRA3LF1respost.out
tests/CRA3/CRA3LF2post.out
tests/CRA3/CRA3LF2respost.out
tests/CRA3/CRA3LF3post.out
tests/CRA3/CRA3LF3respost.out
tests/CRA3/CRA3LFR.out
tests/CRA3/CRA3LFzero.out
tests/CRA3/CRA3Maturity.out
tests/CRA3/CRA3Moult.out
tests/CRA3/CRA3PRIesids.out
tests/CRA3/CRA3PRIpost.out
tests/CRA3/CRA3PRIrespost.out
tests/CRA3/CRA3PooResids.out
tests/CRA3/CRA3Poopost.out
tests/CRA3/CRA3Poorespost.out
tests/CRA3/CRA3Rdev.out
tests/CRA3/CRA3Recruitment.out
tests/CRA3/CRA3SP.out
tests/CRA3/CRA3Select.out
tests/CRA3/CRA3SexRatio.out
tests/CRA3/CRA3SexRatiopost.out
tests/CRA3/CRA3SexRatiorespost.out
tests/CRA3/CRA3Uillegalpost.out
tests/CRA3/CRA3Ulegalpost.out
tests/CRA3/CRA3bvulnref.out
tests/CRA3/CRA3surprod.out
tests/CRA3/Indicators.sum
tests/CRA3/MSY
tests/CRA3/PooRand.dat
tests/CRA3/indicpost.out
tests/CRA3/parampost.out
tests/CRA3/sensitivity.out
tests/CRA3/sims.sum
tests/CRA3/snail.out
tests/CRA5/CRA5
tests/CRA5/CRA5Ball.out
tests/CRA5/CRA5Biomass.out
tests/CRA5/CRA5CPUEResids.out
tests/CRA5/CRA5CPUEpost.out
tests/CRA5/CRA5CPUErespost.out
tests/CRA5/CRA5CRResids.out
tests/CRA5/CRA5CRpost.out
tests/CRA5/CRA5CRrespost.out
tests/CRA5/CRA5Catches.out
tests/CRA5/CRA5Erate.out
tests/CRA5/CRA5FrancisLFs.out
tests/CRA5/CRA5LF1post.out
tests/CRA5/CRA5LF1respost.out
tests/CRA5/CRA5LF2post.out
tests/CRA5/CRA5LF2respost.out
tests/CRA5/CRA5LF3post.out
tests/CRA5/CRA5LF3respost.out
tests/CRA5/CRA5LFR.out
tests/CRA5/CRA5LFzero.out
tests/CRA5/CRA5Maturity.out
tests/CRA5/CRA5Moult.out
tests/CRA5/CRA5PRIesids.out
tests/CRA5/CRA5PRIpost.out
tests/CRA5/CRA5PRIrespost.out
tests/CRA5/CRA5PooResids.out
tests/CRA5/CRA5Poopost.out
tests/CRA5/CRA5Poorespost.out
tests/CRA5/CRA5Rdev.out
tests/CRA5/CRA5Recruitment.out
tests/CRA5/CRA5SP.out
tests/CRA5/CRA5Select.out
tests/CRA5/CRA5SexRatio.out
tests/CRA5/CRA5SexRatiopost.out
tests/CRA5/CRA5SexRatiorespost.out
tests/CRA5/CRA5TagResids.out
tests/CRA5/CRA5Uillegalpost.out
tests/CRA5/CRA5Ulegalpost.out
tests/CRA5/CRA5bvulnref.out
tests/CRA5/CRA5poo.dat
tests/CRA5/CRA5surprod.out
tests/CRA5/Indicators.all
tests/CRA5/Indicators.sum
tests/CRA5/MSY
tests/CRA5/PooRand.dat
tests/CRA5/admodel.cov
tests/CRA5/admodel.dep
tests/CRA5/admodel.hes
tests/CRA5/base011CRA5.ctl
tests/CRA5/check.tmp
tests/CRA5/eigv.rpt
tests/CRA5/fmin.log
tests/CRA5/indicpost.out
tests/CRA5/mpd.out
tests/CRA5/parampost.out
tests/CRA5/reftmp
tests/CRA5/rlmod_v10.b01
tests/CRA5/rlmod_v10.b02
tests/CRA5/rlmod_v10.b03
tests/CRA5/rlmod_v10.b04
tests/CRA5/rlmod_v10.bar
tests/CRA5/rlmod_v10.cor
tests/CRA5/rlmod_v10.ecm
tests/CRA5/rlmod_v10.eva
tests/CRA5/rlmod_v10.hst
tests/CRA5/rlmod_v10.log
tests/CRA5/rlmod_v10.mcm
tests/CRA5/rlmod_v10.p01
tests/CRA5/rlmod_v10.p02
tests/CRA5/rlmod_v10.p03
tests/CRA5/rlmod_v10.p04
tests/CRA5/rlmod_v10.par
tests/CRA5/rlmod_v10.psv
tests/CRA5/rlmod_v10.std
tests/CRA5/rlmod_v12.log
tests/CRA5/rlmod_v12.psv
tests/CRA5/sensitivity.out
tests/CRA5/sims
tests/CRA5/snail.out
tests/CRA5/tmp
tests/CRA5/variance
tests/CRA5/viv.out
version_update.R
