probe_data: Filtered probe lists for EPIC and 450K datasets
In NeilPearson-Lilly/MethyLiution: MethyLiution: A QC Pipeline For Methylation Data
Description
The list of valid probes (for both EPIC and 450K arrays) required for step 2 is included as an accessible dataset, 'probe_data'. This dataset was derived from the list of probes available in the BioConductor packages 'IlluminaHumanMethylationEPICanno.ilm10b2.hg19' and 'IlluminaHumanMethylation450kprobe', with filtering applied to remove probes located within 10bp of a SNP in order to avoid misleading results arising from polymorphism-induced hybridisation issues.
Usage
1
Format
A list of two data frames.
NeilPearson-Lilly/MethyLiution documentation built on May 21, 2019, 11:29 a.m.
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Description
The list of valid probes (for both EPIC and 450K arrays) required for step 2 is included as an accessible dataset, 'probe_data'. This dataset was derived from the list of probes available in the BioConductor packages 'IlluminaHumanMethylationEPICanno.ilm10b2.hg19' and 'IlluminaHumanMethylation450kprobe', with filtering applied to remove probes located within 10bp of a SNP in order to avoid misleading results arising from polymorphism-induced hybridisation issues.
Usage
1 |
Format
A list of two data frames.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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