Files in Neves-P/utilSIE
Utility Functions for DAISIE
.Rbuildignore
.gitignore
.travis.yml
DESCRIPTION
LICENSE
LICENSE.md
NAMESPACE
R/bind_island_trees.R
R/brts2phylo_with_stem.R
R/calc_sum_stats.R
R/cluster_ssh_functions.R
R/data_doc.R
R/file_IO.R
R/helper_ssh_functions.R
R/make_island_tree.R
R/phylo_metrics.R
R/plots.R
R/result_analysis.R
R/utilSIE-package.R
README.md
appveyor.yml
bash_scripts/DAISIE_0_ML.bash
bash_scripts/DAISIE_0_single_seed.bash
bash_scripts/DAISIE_ML.bash
bash_scripts/DAISIE_single_seed.bash
bash_scripts/install_packages.bash
bash_scripts/pipeline_ML.R
data/pilot_study_parameters.rda
man/check_jobs.Rd
man/download_data.Rd
man/download_results.Rd
man/execute_next_setup.Rd
man/experiment_setup.Rd
man/get_available_accounts.Rd
man/get_project_folder.Rd
man/get_project_name.Rd
man/get_simulations_to_run.Rd
man/get_summary_stats.Rd
man/get_super_folder.Rd
man/load_DAISIE_data.Rd
man/load_DAISIE_results.Rd
man/pilot_study_parameters.Rd
man/plot_ncolonist_distribution.Rd
man/plot_nspecies_distribution.Rd
man/read_results.Rd
man/run_simulations_from_MLE.Rd
man/sbatch_experiments.Rd
man/upload_cluster_scripts.Rd
man/utilSIE-package.Rd
pics/AppVeyor.png
pics/Codecov.png
pics/TravisCI.png
pics/rocket.png
tests/testthat.R
tests/testthat/test-execute_next_setup.R
tests/testthat/test-get_available_accounts.R
utilSIE.Rproj
