sbatch_experiments: Starts peregrine cluster runs

In Neves-P/utilSIE: Utility Functions for DAISIE

Description

Starts peregrine cluster runs

Usage

sbatch_experiments(project_name, island_ontogeny, right_setup,
  bash_file_sims, connection, partition, complete_analysis)

Arguments

project_name	String containing project name as returned by get_project_name.
island_ontogeny	Vector of strings or NULL indicating type of island ontogeny process. Can be "beta". For no ontogeny NULL is used.
right_setup	Matrix with experiment setup as returned by experiment_setup.
bash_file_sims	String with path for bash file that starts simulation in the cluster.
connection	ssh connection object created within the main function.
partition	String with peregrine partition name that shuold be used. Defaults to "gelifes". Can be "regular" or "short".
complete_analysis	Boolean stating if a ML run from simulation output generated with current parameters should be started as soon as simulations are over.

Value

nothing.

Author(s)

Pedro Neves

Neves-P/utilSIE documentation built on Nov. 20, 2019, 7 a.m.