Norisama/VFtree: visualization of combined Virulence Factors and Phylogenetic Tree

VFtree is a package which is able to take the tree input in newick format and the vfactors present/absent data in csv/tsv file , process the data, constructed visualization of the core genome phylogenetic tree to associate virulence factor presence/absence with other strain attributes.

Getting started

Package details

AuthorBihan Zhu
MaintainerBihan Zhu <bihan.zhu@mail.utoronto.ca>
LicenseMIT + file LICENSE
Version0.1.0
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("Norisama/VFtree")
Norisama/VFtree documentation built on Dec. 8, 2019, 9:28 a.m.